CTC Isolation and Analysis: A Gateway to Precision Oncology
CTCs offer a non-invasive window into cancer biology. Isolated from blood samples and other biofluids, these rare cells provide critical insights into metastasis, therapeutic resistance, and tumor evolution.
However, their rarity—often as few as one in a billion blood cells—makes CTC isolation and analysis a technical challenge. This is where Bio-Rad’s innovative tools assist scientists the most.
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In 1869, Australian physician Thomas Ashworth first observed CTCs in a cancer patient's blood, introducing the concept of tumor-derived cells traveling through the bloodstream.
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The Challenges of CTC Research
Inefficient CTC Isolation
Extracting CTCs from billions of blood cells while maintaining their viability and integrity is a critical bottleneck. Conventional methods like density gradient centrifugation and negative selection are time-consuming and often fall short, leading to sample loss or contamination.
Low-Resolution CTC Analysis
CTC analysis at the molecular level uncovers critical insights into cancer progression, metastasis, and resistance, but their rarity demands advanced tools to generate reliable, high-resolution data.
Consistency and Reproducibility
CTC workflows must produce consistent results to support translational research for clinical applications. Variability and workflow inefficiencies can hinder progress toward meaningful discoveries.
Leveraging Microfluidics for CTC and CTC Cluster Capture, Enrichment, and Enumeration
Discover an efficient sized-based isolation solution with the Genesis Platform. Celselect Slides™ capture single and clustered CTCs, filtering out smaller blood components like WBCs, RBCs, and platelets while being gentle enough to recover viable, living cells for proliferation and culturing workflows.
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Single-Cell Sequencing Solutions
Unlock the full potential of your CTC isolation and analysis workflows by incorporating the ddSEQ Single Cell Isolator and ddSEQ library prep kits. These tools empower you with high-resolution data to uncover the critical insights hidden within the transcriptome and epigenome of these rare cells.
ddSEQ Single Cell Isolator
Study the transcriptome and epigenome of CTCs isolated with Genesis. This space-efficient instrument partitions individual CTCs captured with the Genesis System for downstream single-cell workflows, including 3’ scRNA-seq or scATAC-seq.
ddSEQ Single-Cell 3’ RNA-seq Kit
- Identify biomarkers and gene expression patterns with high-quality transcriptional profiling.
- Pinpoint pathways driving tumor progression and uncover therapeutic targets.
- Maximize your research potential with cost-effective transcriptional landscape analyses.
ddSEQ Single-Cell ATAC-seq Kit
- Explore chromatin accessibility to uncover epigenetic mechanisms behind metastasis and therapy resistance.
- Reveal regulatory networks shaping cancer progression.
- Drive breakthroughs in epigenetic-based translational research and treatment development.
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Droplet Digital™ PCR (ddPCR) Solutions
Enhance your analysis of CTCs recovered with the Genesis System using ddPCR and PrimePCR™ Assays, enabling absolute quantification of biomarkers, rare mutations, and gene expression changes. This high-sensitivity approach ensures reproducible and high-resolution data for cancer research and translational applications.
QX600™ ddPCR System
Analyze and quantify rare nucleic acid events, transcript levels, and biomarkers from CTCs with ultra-high sensitivity, precision, and advanced multiplexing capabilities. This innovative technology delivers reproducible results, even from minimal sample input.
ddPCR Technology
- Identify and quantify rare mutations with unparalleled sensitivity and precision.
- Detect molecular residual disease (MRD) and therapy resistance markers with rapid turnaround time.
- Enhance liquid biopsy workflows with absolute mutation quantification.
PrimePCR™ Assays on ddPCR
- Precisely quantify single nucleotide variants and actionable mutations.
- Streamline biomarker interrogation with pre-designed, optimized gene expression assays.
- Advance targeted therapy research with reproducible, high-throughput ddPCR workflows.
Shaping the Future of Liquid Biopsy Research
Transform your translational research with advanced liquid biopsy workflows. Bio-Rad’s ddPCR technology provides sensitivity for ctDNA and CTC analysis, uncovering actionable insights into disease states and therapy efficacy.
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Flow Cytometry and Antibody Solutions
Drive your research forward by coupling the Genesis platform, ZE5 Cell Analyzer, validated antibodies, and StarBright™ Dyes for high-throughput, multiparametric flow cytometry for CTC characterization, immune profiling, and biomarker detection.
ZE5™ Cell Analyzer
Simplify your workflows with an automated flow cytometer featuring five lasers, 30 parameters, and a flexible sample loader. This device enables ultra-sensitive, multiparametric immune profiling of CTCs with unparalleled speed and accuracy.
Flow Cytometry with ZE5
- Detect and analyze rare CTC populations with ultra-sensitive, high-throughput flow cytometry.
- Gain multiparametric insights into immune cell interactions with precision and reproducibility.
- Automate and accelerate high-content CTC research with intuitive workflow integration.
Validated Antibodies & StarBright™ Dyes
- Identify key CTC markers with highly specific, flow cytometry-optimized antibodies.
- Streamline immune profiling and functional studies with StarBright Dye conjugated antibodies.
- Ensure reproducible, high-sensitivity detection with rigorously validated reagents.
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Establish Dynamic and Reproducible Workflows
The Genesis Platform enables the isolation of rare CTCs with unmatched sensitivity, yielding consistent, high-quality results. When paired with our ddSEQ, ddPCR, and flow cytometry solutions, it minimizes variability, ensures reproducible performance across projects, and is flexible for sample input. These tools empower you to adapt effortlessly, meeting the evolving demands of your downstream workflows.
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Featured Resources
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Dual Isolation and Profiling of CTCs and ctDNA from a Single Liquid Biopsy Sample
See how the Genesis System and ddPCR technology enable simultaneous isolation of CTCs and ctDNA from liquid biopsy samples, delivering noninvasive, high-resolution molecular insights for cancer monitoring and therapeutic decision-making.
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Profiling EGFR DNA Mutation Analysis in Circulating Rare Cells Using the Genesis Cell Isolation System with Celselect Slides and ddPCR
Learn how the Genesis Cell Isolation System and ddPCR efficiently detect EGFR mutations in rare CTCs, providing absolute quantification for cancer biomarker discovery and treatment monitoring.
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ddSEQ™ Single-Cell 3' RNA-Seq Kit User Guide
Explore workflows, best practices, and protocols for the Bio-Rad ddSEQ Single-Cell 3' RNA-Seq Kit, covering single-cell encapsulation, cDNA library preparation, and sequencing.
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Enrichment and Molecular Profiling of Tumor Cells for Lung Cancer Biomarker Discovery
Discover how the Genesis Cell Isolation System, Celselect Slides, RNA-Seq, and RT-qPCR enable tumor cell enrichment and biomarker discovery for lung cancer using liquid biopsies.
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Antibody Selection and Preparation for Circulating Tumor Cell (CTC) and Rare Cell Isolation
Optimize antibody selection and staining for rare cell analysis with the Bio-Rad Celselect Slides Enumeration Assay. This guide provides workflows and tips for accurate cell identification.
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ddSEQ™ Single-Cell Applications Sample Preparation Guide
Understand best practices for single-cell preparation with Bio-Rad’s ddSEQ Sample Preparation Guide. This resource provides protocols, best practices, and workflows for RNA-Seq and ATAC-Seq assays.
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Explore Peer-Reviewed Research Empowered by Bio-Rad Solutions
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Explore Additional Oncology Solutions
Tumor Profiling
Optimize tumor profiling with advanced molecular tools. Detect rare mutations, analyze gene expression, and uncover biomarkers with confidence and precision.
Biomarker Detection
Transform biomarker research with ddPCR. Identify key mutations, track treatment response, and drive breakthroughs in precision medicine.
ctDNA Analysis
Enhance your oncology research with ddPCR for ctDNA analysis. Detect rare mutations, track MRD, and monitor recurrence with unmatched sensitivity and accuracy.
CML Monitoring
Simplify CML monitoring with ddPCR technology. Achieve ultra-sensitive BCR-ABL detection, streamlined workflows, and reproducible results across labs.

