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ctDNA Analysis

Transform your Research with Advanced ctDNA Testing Solutions

Circulating tumor DNA (ctDNA) analysis continues to advance cancer research and treatment development. This non-invasive method enables the detection of tumor-derived DNA in blood and biofluids, offering critical research insights into tumor progression, therapy effectiveness, and recurrence. By investigating ways to more precisely measure molecular residual disease (MRD), also known as minimal residual disease or measurable residual disease, and monitor recurrence before symptoms reemerge, ctDNA testing has the potential to enable earlier interventions that lead to significantly improved outcomes.

The value of ctDNA analysis has gained recognition for clinical trials as the USFDA and other regulatory agencies develop guidance for using ctDNA biomarkers as potential endpoints. This capability facilitates faster patient enrollment, reduces costs, and streamlines the approval process, making it essential for the advancement of oncology research.

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    Did you know?

    In 1948, Mandel and Metais discovered free DNA in the bloodstream, laying the groundwork for ctDNA testing. Its use in oncology began in earnest in the early 2000s, leading to breakthroughs in early cancer detection, tumor mutation profiling, and MRD monitoring.1

Overcome the Challenges of ctDNA Analysis with ddPCR Technology

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    Enhancing Sensitivity for Rare ctDNA Detection

    ctDNA exists in trace amounts, particularly in low-shedding tumors, early-stage cancers, or after curative treatments. The QX600 ddPCR system provides high sensitivity and precision, enabling accurate detection and quantification of mutated DNA amidst abundant wild-type sequences in complex biofluids.

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    Targeting Multiple Biomarkers Simultaneously

    Simultaneous quantification of multiple targets enhances the power of ctDNA analysis. The QX600 ddPCR system enables user-friendly multiplexing, simplifying lab logistics and minimizing required sample input while maintaining accuracy across numerous biomarkers. 

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    Maintaining Reproducibility Across Studies

    For research addressing therapy efficacy analysis, MRD detection, and recurrence monitoring, ddPCR platforms provide highly reproducible results across diverse samples and studies. The flagship QX600 ddPCR system ensures reliable, high-quality data, seamlessly integrating into your clinical oncology research applications.

  • rapid cost effective ctDNA testing icon

    Rapid, Cost-Effective ctDNA Testing in Clinical Research

    The QX family of ddPCR platforms offer streamlined workflows, intuitive software, and expert support. The QX600 ddPCR system provides advanced multiplexing and simplified implementation, making it ideal for longitudinal studies, biomarker characterization, and clinical research.

Explore the QX600 ddPCR System

When can you leverage ddPCR technology for ctDNA testing?

Unlock the full potential of ctDNA analysis with ddPCR—offering unmatched sensitivity, faster turnaround times, and cost-effective solutions. Designed for accuracy and efficiency, there is a best fit ddPCR method for every stage of the clinical research continuum, from MRD assessment to recurrence monitoring, ensuring precise and reliable results where they matter most.

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Learn More About ddPCR for ctDNA Analysis

Revolutionizing Clinical Research Through ctDNA Analysis

Therapy Response Analysis Research

Understanding and effectively optimizing therapeutic response analysis is vital for successful cancer treatment research. ctDNA testing delivers an innovative view of tumor dynamics, empowering researchers to evaluate treatment responses as they happen. This ensures you develop the most targeted and effective care possible.

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The ddPCR Advantage

  • Delivers early, actionable insights through precise ctDNA quantification, often before imaging detects changes
  • Enables multiplex biomarker tracking to streamline workflows and preserve sample material
  • Accelerates therapy evaluation in clinical research with a broad library of optimized assays
  • Supports dynamic treatment adjustments to improve patient outcomes

MRD Detection Research

Understanding and effectively optimizing therapeutic response is vital for successful cancer treatment research. ctDNA testing delivers an innovative view of tumor dynamics, empowering researchers to evaluate treatment responses as they happen. This ensures you develop the most targeted and effective care possible.

See How ddPCR is Transforming MRD Research

The ddPCR Advantage

  • Facilitates precise MRD detection in solid tumors and superior monitoring in hematologic malignancies
  • Detects rare mutated DNA fragments among abundant wild-type sequences
  • Streamlined workflows minimize hands-on time for efficient processing
  • High precision and reproducibility support confident treatment assessment and large-scale studies

Recurrence Monitoring Research

Early detection of cancer recurrence plays a critical role in improving patient outcomes. Serial ctDNA quantification using highly sensitive ddPCR enables near real-time, non-invasive monitoring, often revealing molecular signs of relapse weeks or months before conventional imaging or clinical symptoms appear.

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The ddPCR Advantage

  • Supports cost-effective, ultra-sensitive, same-day detection of mutation-specific ctDNA
  • Streamlined workflow eliminates the need for complex bioinformatics
  • Enables precise, serial monitoring for cancer recurrence research
  • Advanced multiplexing on the QX600 platform delivers comprehensive insights across multiple targets
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DNA methylation

Harness the Power of Methylation Detection for Deeper Insights

DNA methylation plays a key role in cancer biology, influencing gene expression and tumor development. With ddPCR and methylation-sensitive restriction enzyme (MSRE) technologies, you can achieve ultra-sensitive, cost-effective methylation detection—unlocking critical epigenetic insights to advance your biomarker research​.

Featured Resources

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Groundbreaking MRD Breast Cancer Research

Explore how ctDNA analysis is transforming breast cancer care, predicting relapse early, and driving groundbreaking advances in oncology through innovation and perseverance.

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thumbnail image of article Counting DNA Molecule by Molecule

Counting DNA Molecule by Molecule

Discover the transformative impact of ddPCR on nucleic acid quantification, from detecting rare variants to enhancing gene therapy and advancing clinical research.

video thumbnail of Decisive-moments In Precision Medicine are Revolutionizing Care

Decisive moments In Precision Medicine are Revolutionizing Care

Uncover the power of ddPCR in advancing precision medicine. Monitor ctDNA to drive research covering non-invasively for treatment responses, resistance mutations, and relapse prediction with accuracy.

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thumbnail image of article ctDNA Analysis Across Cancer Research Continuum

ctDNA Analysis Across the Cancer Research Continuum

Learn how ddPCR revolutionizes ctDNA analysis, delivering accurate, non-invasive biomarker detection to advance personalized cancer care and improve patient outcomes.

Discover Peer-Reviewed Research Empowered by Bio-Rad Solutions

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References

1 Mandel, P. and Métais, P. (1948) Les acides nucléiques du plasma sanguin chez l’Homme. Comptes Rendus des Seances de la Societe de Biologie et de ses Filiales, 142, 241-243.

Explore Additional Oncology Solutions

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Biomarker Detection

Transform biomarker research with ddPCR. Identify key mutations, track treatment response, and drive breakthroughs in precision medicine.

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CTC Isolation & Analysis

Streamline CTC isolation with cutting-edge microfluidics and molecular tools. Enhance reproducibility and accelerate discoveries in liquid biopsy research.

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Tumor Profiling

Optimize tumor profiling with advanced molecular tools. Detect rare mutations, analyze gene expression, and uncover biomarkers with confidence and precision.

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IVD Assay Development

Optimize IVD assay development with ultra-sensitive ddPCR. Streamline workflows, reduce variability, and ensure compliance with global standards.