Gene:  COL11A1, Human

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PrimePCR Primer Assays for Real-Time PCR oligo primer pair gene expression assay target

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This gene encodes one of the two alpha chains of type XI collagen a minor fibrillar collagen. Type XI collagen is a heterotrimer but the third alpha chain is a post-translationally modified alpha 1 type II chain. Mutations in this gene are associated with type II Stickler syndrome and with Marshall syndrome. A single-nucleotide polymorphism in this gene is also associated with susceptibility to lumbar disc herniation. Multiple transcript variants have been identified for this gene. [provided by RefSeq Nov 2009]

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PrimePCR™ SYBR® Green Assay: COL11A1, Human
collagen, type XI, alpha 1

Assay Type: SYBR® Green
Assay Design: Intron-spanning
Application: Gene Expression
Unique Assay ID: qHsaCID0009011
Info:   Same primer pair as used in probe assay qHsaCIP0027016
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PrimePCR™ Probe Assay: COL11A1, Human
collagen, type XI, alpha 1

Assay Type: Probe
Assay Design: Intron-spanning
Application: Gene Expression
Unique Assay ID: qHsaCIP0027016
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PrimePCR™ ddPCR™ Mutation Assay:COL11A1 p.E342G, Human
collagen, type XI, alpha 1

Assay Type: Probe
Application: Mutation Detection in silico design
Unique Assay ID: dHsaIS2505310
Info:   69nt amplicon; crosses exon-intron junction; in-silico
 
Fluorophore:   FAM
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PrimePCR™ ddPCR™ Mutation Assay:COL11A1 WT for p.E342G, Human
collagen, type XI, alpha 1

Assay Type: Probe
Application: Mutation Detection in silico design
Unique Assay ID: dHsaIS2505311
Info:   69nt amplicon; crosses exon-intron junction; in-silico
 
Fluorophore:   HEX
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    Related pathways not available
Number Description Download
6262 PrimePCR Assays: Meeting the MIQE Guidelines by Full Wet-Lab Validation, Rev B Click to download
6263 PrimePCR Pathway Analysis: Pathway Curation and Real-Time PCR Panel Design Strategy, Rev B Click to download
6290 PrimePCR Assays and Panels Brochure, Rev D Click to download
LIT10026370 Instruction Manual, PrimePCR Assays, Panels, and Controls, Rev E Click to download
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