PrimePCR™ lncRNA® Probe Assay:LINC00339, Human

PrimePCR Primer Assays for Real-Time PCR oligo primer pair tube for SYBR Green gene expression.

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

Info:   Same primer pair as used in SYBR assay qhsaLED0134885. May amplify unspliced transcripts of an antisense gene.

List Price:    $247.00
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PrimePCR™ IncRNA PreAmp for Probe Assay: LINC00339, Human
Reaction:     400 reactions
Gene-specific PCR primers for the unbiased preamplification of small quantities of cDNA for subsequent use in downstream gene expression analysis.

PrimePCR™ IncRNA Template for Probe Assay: LINC00339, Human
Reaction:     4 billion copies/200 µl
Gene-specific synthetic DNA template designed to give a positive real-time PCR result when used with the corresponding probe assay.


Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   lncRNA Expression
Unique Assay ID:   qhsaLEP0212125
Assay Design:   exonic
Chromosome Location:   chr1:22030466-22030580question
Amplicon Length:   85
Splice Variants Targeted:   ENST00000634451 ENST00000635450 ENST00000416769 ENST00000452322 ENST00000420503 ENST00000434233 ENST00000635675 ENST00000634934 ENST00000634712
LNCipedia Splice Variants Targeted:   LINC00339:11 LINC00339:14 LINC00339:13 LINC00339:8 LINC00339:9 LINC00339:7 LINC00339:6 LINC00339:5 LINC00339:3 LINC00339:2 LINC00339:1 LINC00339:10 LINC00339:12 LINC00339:15 LINC00339:21 LINC00339:25 LINC00339:24 LINC00339:26 LINC00339:23 LINC00339:22 LINC00339:19 LINC00339:18 LINC00339:17 LINC00339:20 LINC00339:16

Gene Information

Not Available

Gene Symbol:   LINC00339
Gene Name:   long intergenic non-protein coding RNA 339 [Source:HGNC Symbol;Acc:HGNC:25011]
Aliases:   HSPC157, NCRNA00339
RefSeq:   Not Available
Ensembl:   ENSG00000218510
LNCipedia:   LINC00339
Entrez:   29092
Chromosome Mapping:   1p36.12
Gene Strand:   Forward strand

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)

Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ Universal SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.998400
y-intercept 36.520000
Efficiency 1.93

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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