Transport - Clathrin-coated vesicle cycle

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Clathrin-coated vesicle cycle

Transport vesicles are classified according to the components of the protein coat that surrounds them during their genesis and early life. One of the most common and probably best-characterized classes of coated vesicle is that comprising three-layered Clathrin-coated vesicles (CCVs). CCVs are so-called because the main component of the coat is complex Clathrin, which forms a polymeric mechanical scaffold on the vesicle surface. The inner, membrane layer with its embedded cargo is linked to the outer, Clathrin layer by a middle layer that consists of various clathrin-adaptor molecules and other proteins that have accessory/regulatory roles in CCV assembly. The classical key components of absolute majority cargos Clathrin-dependent endocytosis are AP complex 2, Eps15, AP180, Epsin 1, HIP1/ HIP12 and others [1], [2], [3].

After the Clathrin lattice is formed, dynamins (e.g., Dynamin-2), endophilin (e.g., Endophilin B1), epsins and amphiphysin (e.g., BIN1 (Amphiphysin II)) are involved in membrane invagination and Clathrin rearrangements. The plus-end motor Myosin I pulls the Dynamin-2 ring in the direction of the cell surface, while the minus-end motor Myosin VI pulls the coated bud into the cytosol. The resulting strain could then sever the constricted stalk beneath the dynamin ring [4].

Next phase is a fusion of coated-pit-derived primary endocytic vesicles with sorting endosomes. It is regulated by member RAS oncogene family Rab-5A, EEA1 [5], [6], [7] and Soluble N-ethylmaleimide-sensitive factor attachment protein receptors (SNARE) [7], [8].

The maturation of sorting endosomes to late endosomes is realized with participation member RAS oncogene family Rab-7 via unknown mechanism [9], [10].

Late endosomes may participate in fusion to other late endosomes or lysosome via SNARE-mediated mechanism. Combinatorial SNARE complexes with VAMP7 or VAMP8 define these different late endocytic fusion events, accordingly [8], [11], [12].

In addition, Rab-7 is directly involved in the aggregation and fusion of late endocytic structures/lysosomes [11], [13].

Then, cargo may be delivered to the Golgi from late endosomes with participation RAS oncogene family Rab-9 [10], [14], [15]. In addition, proteins from endoplasmic reticulum may be translocated to the COPII-dependent manner [16].

Modified in endoplasmic reticulum and/or Golgi cargo may be delivered from the Golgi back to the cell surface, possibly with participation Rab-8/ Optineurin/ Myosin VI pathway [7], [17], [18] and/or coat protein complex termed Coatomer [7], [19], [20].

Moreover, cargo may be delivered to the cell surface via shot pathway from endosomes via different recycling endosomes [7]. It is realized mainly via Rab-4 and/or Rab-11A-dependent mechanisms [10], [21], [22].

It is shown, that recycling endosomes (endocytic recycling) to Golgi traffic may be realized via different SNARE complexes [7], [8], [23].



Objects list:

AP complex 2 AP complex 2 Group of complexes
AP180 Clathrin coat assembly protein AP180
BIN1 (Amphiphysin II) Myc box-dependent-interacting protein 1
COPII COPII Group of complexes
Clathrin Clathrin Group of complexes
Coatomer Coatomer Group of complexes
Dynamin-2 Dynamin-2
EEA1 Early endosome antigen 1
Endophilin B1 Endophilin-B1
Eps15 Epidermal growth factor receptor substrate 15
Epsin 1 Epsin-1
HIP1 Huntingtin-interacting protein 1
HIP12 Huntingtin-interacting protein 1-related protein
Myosin I Myosin I Protein group
Myosin VI Myosin-VI
Optineurin Optineurin
Rab-11A Ras-related protein Rab-11A
Rab-4 Rab-4 Protein group
Rab-5A Ras-related protein Rab-5A
Rab-7 Ras-related protein Rab-7a
Rab-8 Ras-related protein Rab-8A
Rab-9 Ras-related protein Rab-9A
VAMP7 Vesicle-associated membrane protein 7
VAMP8 Vesicle-associated membrane protein 8

References:

  1. Wendland B
    Epsins: adaptors in endocytosis? Nature reviews. Molecular cell biology 2002 Dec;3(12):971-7
  2. Szymkiewicz I, Shupliakov O, Dikic I
    Cargo- and compartment-selective endocytic scaffold proteins. The Biochemical journal 2004 Oct 1;383(Pt 1):1-11
  3. Edeling MA, Smith C, Owen D
    Life of a clathrin coat: insights from clathrin and AP structures. Nature reviews. Molecular cell biology 2006 Jan;7(1):32-44
  4. Ungewickell EJ, Hinrichsen L
    Endocytosis: clathrin-mediated membrane budding. Current opinion in cell biology 2007 Aug;19(4):417-25
  5. McBride HM, Rybin V, Murphy C, Giner A, Teasdale R, Zerial M
    Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13. Cell 1999 Aug 6;98(3):377-86
  6. Woodman PG
    Biogenesis of the sorting endosome: the role of Rab5. Traffic (Copenhagen, Denmark) 2000 Sep;1(9):695-701
  7. Maxfield FR, McGraw TE
    Endocytic recycling. Nature reviews. Molecular cell biology 2004 Feb;5(2):121-32
  8. Hong W
    SNAREs and traffic. Biochimica et biophysica acta 2005 Jun 30;1744(2):120-44
  9. Feng Y, Press B, Wandinger-Ness A
    Rab 7: an important regulator of late endocytic membrane traffic. The Journal of cell biology 1995 Dec;131(6 Pt 1):1435-52
  10. Somsel Rodman J, Wandinger-Ness A
    Rab GTPases coordinate endocytosis. Journal of cell science 2000 Jan;113 Pt 2:183-92
  11. Bucci C, Thomsen P, Nicoziani P, McCarthy J, van Deurs B
    Rab7: a key to lysosome biogenesis. Molecular biology of the cell 2000 Feb;11(2):467-80
  12. Pryor PR, Mullock BM, Bright NA, Lindsay MR, Gray SR, Richardson SC, Stewart A, James DE, Piper RC, Luzio JP
    Combinatorial SNARE complexes with VAMP7 or VAMP8 define different late endocytic fusion events. EMBO reports 2004 Jun;5(6):590-5
  13. Stein MP, Feng Y, Cooper KL, Welford AM, Wandinger-Ness A
    Human VPS34 and p150 are Rab7 interacting partners. Traffic (Copenhagen, Denmark) 2003 Nov;4(11):754-71
  14. Barbero P, Bittova L, Pfeffer SR
    Visualization of Rab9-mediated vesicle transport from endosomes to the trans-Golgi in living cells. The Journal of cell biology 2002 Feb 4;156(3):511-8
  15. Aivazian D, Serrano RL, Pfeffer S
    TIP47 is a key effector for Rab9 localization. The Journal of cell biology 2006 Jun 19;173(6):917-26
  16. Gurkan C, Stagg SM, Lapointe P, Balch WE
    The COPII cage: unifying principles of vesicle coat assembly. Nature reviews. Molecular cell biology 2006 Oct;7(10):727-38
  17. Sahlender DA, Roberts RC, Arden SD, Spudich G, Taylor MJ, Luzio JP, Kendrick-Jones J, Buss F
    Optineurin links myosin VI to the Golgi complex and is involved in Golgi organization and exocytosis. The Journal of cell biology 2005 Apr 25;169(2):285-95
  18. Au JS, Puri C, Ihrke G, Kendrick-Jones J, Buss F
    Myosin VI is required for sorting of AP-1B-dependent cargo to the basolateral domain in polarized MDCK cells. The Journal of cell biology 2007 Apr 9;177(1):103-14
  19. Antonny B, Huber I, Paris S, Chabre M, Cassel D
    Activation of ADP-ribosylation factor 1 GTPase-activating protein by phosphatidylcholine-derived diacylglycerols. The Journal of biological chemistry 1997 Dec 5;272(49):30848-51
  20. Godi A, Di Campli A, Konstantakopoulos A, Di Tullio G, Alessi DR, Kular GS, Daniele T, Marra P, Lucocq JM, De Matteis MA
    FAPPs control Golgi-to-cell-surface membrane traffic by binding to ARF and PtdIns(4)P. Nature cell biology 2004 May;6(5):393-404
  21. de Renzis S, Sonnichsen B, Zerial M
    Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes. Nature cell biology 2002 Feb;4(2):124-33
  22. Hales CM, Griner R, Hobdy-Henderson KC, Dorn MC, Hardy D, Kumar R, Navarre J, Chan EK, Lapierre LA, Goldenring JR
    Identification and characterization of a family of Rab11-interacting proteins. The Journal of biological chemistry 2001 Oct 19;276(42):39067-75
  23. Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L
    Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform. The Journal of cell biology 2002 Feb 18;156(4):653-64

  1. Wendland B
    Epsins: adaptors in endocytosis? Nature reviews. Molecular cell biology 2002 Dec;3(12):971-7
  2. Szymkiewicz I, Shupliakov O, Dikic I
    Cargo- and compartment-selective endocytic scaffold proteins. The Biochemical journal 2004 Oct 1;383(Pt 1):1-11
  3. Edeling MA, Smith C, Owen D
    Life of a clathrin coat: insights from clathrin and AP structures. Nature reviews. Molecular cell biology 2006 Jan;7(1):32-44
  4. Ungewickell EJ, Hinrichsen L
    Endocytosis: clathrin-mediated membrane budding. Current opinion in cell biology 2007 Aug;19(4):417-25
  5. McBride HM, Rybin V, Murphy C, Giner A, Teasdale R, Zerial M
    Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13. Cell 1999 Aug 6;98(3):377-86
  6. Woodman PG
    Biogenesis of the sorting endosome: the role of Rab5. Traffic (Copenhagen, Denmark) 2000 Sep;1(9):695-701
  7. Maxfield FR, McGraw TE
    Endocytic recycling. Nature reviews. Molecular cell biology 2004 Feb;5(2):121-32
  8. Hong W
    SNAREs and traffic. Biochimica et biophysica acta 2005 Jun 30;1744(2):120-44
  9. Feng Y, Press B, Wandinger-Ness A
    Rab 7: an important regulator of late endocytic membrane traffic. The Journal of cell biology 1995 Dec;131(6 Pt 1):1435-52
  10. Somsel Rodman J, Wandinger-Ness A
    Rab GTPases coordinate endocytosis. Journal of cell science 2000 Jan;113 Pt 2:183-92
  11. Bucci C, Thomsen P, Nicoziani P, McCarthy J, van Deurs B
    Rab7: a key to lysosome biogenesis. Molecular biology of the cell 2000 Feb;11(2):467-80
  12. Pryor PR, Mullock BM, Bright NA, Lindsay MR, Gray SR, Richardson SC, Stewart A, James DE, Piper RC, Luzio JP
    Combinatorial SNARE complexes with VAMP7 or VAMP8 define different late endocytic fusion events. EMBO reports 2004 Jun;5(6):590-5
  13. Stein MP, Feng Y, Cooper KL, Welford AM, Wandinger-Ness A
    Human VPS34 and p150 are Rab7 interacting partners. Traffic (Copenhagen, Denmark) 2003 Nov;4(11):754-71
  14. Barbero P, Bittova L, Pfeffer SR
    Visualization of Rab9-mediated vesicle transport from endosomes to the trans-Golgi in living cells. The Journal of cell biology 2002 Feb 4;156(3):511-8
  15. Aivazian D, Serrano RL, Pfeffer S
    TIP47 is a key effector for Rab9 localization. The Journal of cell biology 2006 Jun 19;173(6):917-26
  16. Gurkan C, Stagg SM, Lapointe P, Balch WE
    The COPII cage: unifying principles of vesicle coat assembly. Nature reviews. Molecular cell biology 2006 Oct;7(10):727-38
  17. Sahlender DA, Roberts RC, Arden SD, Spudich G, Taylor MJ, Luzio JP, Kendrick-Jones J, Buss F
    Optineurin links myosin VI to the Golgi complex and is involved in Golgi organization and exocytosis. The Journal of cell biology 2005 Apr 25;169(2):285-95
  18. Au JS, Puri C, Ihrke G, Kendrick-Jones J, Buss F
    Myosin VI is required for sorting of AP-1B-dependent cargo to the basolateral domain in polarized MDCK cells. The Journal of cell biology 2007 Apr 9;177(1):103-14
  19. Antonny B, Huber I, Paris S, Chabre M, Cassel D
    Activation of ADP-ribosylation factor 1 GTPase-activating protein by phosphatidylcholine-derived diacylglycerols. The Journal of biological chemistry 1997 Dec 5;272(49):30848-51
  20. Godi A, Di Campli A, Konstantakopoulos A, Di Tullio G, Alessi DR, Kular GS, Daniele T, Marra P, Lucocq JM, De Matteis MA
    FAPPs control Golgi-to-cell-surface membrane traffic by binding to ARF and PtdIns(4)P. Nature cell biology 2004 May;6(5):393-404
  21. de Renzis S, Sonnichsen B, Zerial M
    Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes. Nature cell biology 2002 Feb;4(2):124-33
  22. Hales CM, Griner R, Hobdy-Henderson KC, Dorn MC, Hardy D, Kumar R, Navarre J, Chan EK, Lapierre LA, Goldenring JR
    Identification and characterization of a family of Rab11-interacting proteins. The Journal of biological chemistry 2001 Oct 19;276(42):39067-75
  23. Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L
    Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform. The Journal of cell biology 2002 Feb 18;156(4):653-64

Target Details

Click on a target from the pathway image to view related information.