PrimePCR™ Probe Assay: ZNF384, Human


Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $202.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCIP0029556
Assay Design:   Intron-spanning
Chromosome Location:   12:6788332-6797379question
Amplicon Length:   102
Splice Variants Targeted:   ENST00000396801 ENST00000361959 ENST00000355772 ENST00000396799 ENST00000436774 ENST00000542796 ENST00000540915 ENST00000535485 ENST00000538829 ENST00000542351 ENST00000537248 ENST00000319770 ENST00000396795

Gene Information

This gene encodes a C2H2-type zinc finger protein which may function as a transcription factor. This gene also contains long CAG trinucleotide repeats that encode consecutive glutamine residues. The protein appears to bind and regulate the promoters of the extracellular matrix genes MMP1 MMP3 MMP7 and COL1A1. Studies in mouse suggest that nuclear matrix transcription factors (NP/NMP4) may be part of a general mechanical pathway that couples cell construction and function during extracellular matrix remodeling. Alternative splicing results in multiple transcript variants. Recurrent rearrangements of this gene with the Ewing's sarcoma gene EWSR1 on chromosome 22 or with the TAF15 gene on chromosome 17 or with the TCF3 (E2A) gene on chromosome 19 have been observed in acute leukemia. A related pseudogene has been identified on chromosome 7. [provided by RefSeq Apr 2011]

Gene Symbol:   ZNF384
Gene Name:   zinc finger protein 384
Aliases:   CAGH1, CAGH1A, CIZ, ERDA2, FLJ59043, NMP4, NP, TNRC1
RefSeq:   NC_000012.11 NT_009759.16
Ensembl:   ENSG00000126746
Entrez:   171017
UniGene:   Hs.103315
Chromosome Mapping:   12p12

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)

Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999800
y-intercept 35.190000
Efficiency 99

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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