PrimePCR™ Probe Assay: SYN3, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $255.00
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PrimePCR™ PreAmp for Probe Assay: SYN3, Human
Reaction:     400 reactions
Gene-specific PCR primers for the unbiased preamplification of small quantities of cDNA for subsequent use in downstream gene expression analysis.

PrimePCR™ Template for Probe Assay: SYN3, Human
Reaction:     200 x 20 µl reactions
Gene-specific synthetic DNA template designed to give a positive real-time PCR result when used with the corresponding probe assay.


Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCIP0029520
Assay Design:   Intron-spanning
Chromosome Location:   22:33327407-33376673question
Amplicon Length:   74
Splice Variants Targeted:   ENST00000358763 ENST00000332840 ENST00000390686

Gene Information

This gene is a member of the synapsin gene family. Synapsins encode neuronal phosphoproteins which associate with the cytoplasmic surface of synaptic vesicles. Family members are characterized by common protein domains and they are implicated in synaptogenesis and the modulation of neurotransmitter release suggesting a potential role in several neuropsychiatric diseases. The protein encoded by this gene shares the synapsin family domain model with domains A C and E exhibiting the highest degree of conservation. The protein contains a unique domain J located between domains C and E. Based on this gene's localization to 22q12.3 a possible schizophrenia susceptibility locus and the established neurobiological roles of the synapsins this family member may represent a candidate gene for schizophrenia. The TIMP3 gene is located within an intron of this gene and is transcribed in the opposite direction. Alternative splicing of this gene results in multiple splice variants that encode different isoforms. [provided by RefSeq Oct 2008]

Gene Symbol:   SYN3
Gene Name:   synapsin III
Aliases:   Not Available
RefSeq:   NG_009117.1 NC_000022.10 NT_011520.12
Ensembl:   ENSG00000185666
Entrez:   8224
Chromosome Mapping:   22q12.3

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)

Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999600
y-intercept 35.620000
Efficiency 97

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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