PrimePCR™ SYBR® Green Assay: SHMT1, Human

PrimePCR Primer Assays for Real-Time PCR oligo primer pair tube for SYBR Green gene expression

Real-time PCR primer assay designed for SYBR® Green gene expression analysis.

Info:   Same primer pair as used in probe assay qHsaCIP0028410

List Price:    $142.00
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Assay Information

Technology:   qPCR
Assay Type:   SYBR® Green
Application:   Gene Expression
Unique Assay ID:   qHsaCID0012351
Assay Design:   Intron-spanning
Chromosome Location:   17:18257079-18259308question
Amplicon Length:   132
Splice Variants Targeted:   ENST00000316694 ENST00000354098 ENST00000395685 ENST00000395682 ENST00000352886 ENST00000539052

Gene Information

This gene encodes the cellular form of serine hydroxymethyltransferase a pyridoxal phosphate-containing enzyme that catalyzes the reversible conversion of serine and tetrahydrofolate to glycine and 510-methylene tetrahydrofolate. This reaction provides one carbon units for synthesis of methionine thymidylate and purines in the cytoplasm. This gene is located within the Smith-Magenis syndrome region on chromosome 17. Alternative splicing of this gene results in 2 transcript variants encoding 2 different isoforms. Additional transcript variants have been described but their biological validity has not been determined. [provided by RefSeq Jul 2008]

Gene Symbol:   SHMT1
Gene Name:   serine hydroxymethyltransferase 1 (soluble)
Aliases:   CSHMT, MGC15229, MGC24556, SHMT
RefSeq:   NC_000017.10 NG_017111.1 NT_010718.16
Ensembl:   ENSG00000176974
Entrez:   6470
UniGene:   Hs.513987
Chromosome Mapping:   17p11.2

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.998900
y-intercept 35.600000
Efficiency 95

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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