PrimePCR™ Probe Assay: UBR1, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCEP0053118
Assay Design:   exonic
Chromosome Location:   15:43317033-43317150question
Amplicon Length:   88
Splice Variants Targeted:   ENST00000290650 ENST00000569243 ENST00000382177

Gene Information

The N-end rule pathway is one proteolytic pathway of the ubiquitin system. The recognition component of this pathway encoded by this gene binds to a destabilizing N-terminal residue of a substrate protein and participates in the formation of a substrate-linked multiubiquitin chain. This leads to the eventual degradation of the substrate protein. The protein described in this record has a RING-type zinc finger and a UBR-type zinc finger. Mutations in this gene have been associated with Johanson-Blizzard syndrome. [provided by RefSeq Jul 2008]

Gene Symbol:   UBR1
Gene Name:   ubiquitin protein ligase E3 component n-recognin 1
Aliases:   JBS, MGC142065, MGC142067
RefSeq:   NC_000015.9 NG_012182.1 NT_010194.17
Ensembl:   ENSG00000159459
Entrez:   197131
Chromosome Mapping:   15q13

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ Universal SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.998700
y-intercept 36.050000
Efficiency 99

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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