PrimePCR™ Probe Assay: PTPRD, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $202.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCEP0052868
Assay Design:   exonic
Chromosome Location:   9:8517958-8518103question
Amplicon Length:   116
Splice Variants Targeted:   ENST00000381196 ENST00000486161 ENST00000397606 ENST00000356435 ENST00000360074 ENST00000358503 ENST00000355233 ENST00000397617 ENST00000397611 ENST00000537002 ENST00000540109

Gene Information

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth differentiation mitotic cycle and oncogenic transformation. This PTP contains an extracellular region a single transmembrane segment and two tandem intracytoplasmic catalytic domains and thus represents a receptor-type PTP. The extracellular region of this protein is composed of three Ig-like and eight fibronectin type III-like domains. Studies of the similar genes in chicken and fly suggest the role of this PTP is in promoting neurite growth and regulating neurons axon guidance. Multiple alternatively spliced transcript variants of this gene have been reported. A related pseudogene has been identified on chromosome 5. [provided by RefSeq Jan 2010]

Gene Symbol:   PTPRD
Gene Name:   protein tyrosine phosphatase, receptor type, D
Aliases:   HPTP, HPTPD, HPTPDELTA, MGC119750, MGC119751, MGC119752, MGC119753, PTPD, RPTPDELTA
RefSeq:   NC_000009.11 NT_008413.18
Ensembl:   ENSG00000153707
Entrez:   5789
UniGene:   Hs.446083
Chromosome Mapping:   9p23-p24.3

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ Universal SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.998700
y-intercept 35.880000
Efficiency 98

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

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