PrimePCR™ Probe Assay: HD1, Arabidopsis


Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $208.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qAthCEP0026840
Assay Design:   Exonic
Chromosome Location:   4:17899345-17899490question
Amplicon Length:   116
Splice Variants Targeted:   AT4G38130.1 AT4G38130.2 AT1G35720.1

Gene Information

Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.

Gene Symbol:   HD1
Gene Name:   Histone deacetylase 1
Aliases:   Not Available
RefSeq:   NM_119974 NM_001085042
Ensembl:   AT4G38130
Entrez:   829969
UniGene:   At.25069
Chromosome Mapping:   Not Available

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