PrimePCR™ Probe Assay: ARF1, Arabidopsis


Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qAthCEP0023816
Assay Design:   Exonic
Chromosome Location:   1:21983223-21983370question
Amplicon Length:   118
Splice Variants Targeted:   AT4G15450.1 AT1G59750.1 AT1G59750.2 AT1G59750.3 AT1G59750.4

Gene Information

Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.

Gene Symbol:   ARF1
Gene Name:   Auxin response factor 1
Aliases:   Not Available
RefSeq:   NM_001198337 NM_001036131 NM_104668 NM_179499
Ensembl:   AT1G59750
Entrez:   842268
UniGene:   At.74832
Chromosome Mapping:   Not Available

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