PrimePCR™ SYBR® Green Assay: NRPD2A, Arabidopsis

PrimePCR Primer Assays for Real-Time PCR oligo primer pair tube for SYBR Green gene expression

Real-time PCR primer assay designed for SYBR® Green gene expression analysis.

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Assay Information

Technology:   qPCR
Assay Type:   SYBR® Green
Application:   Gene Expression
Unique Assay ID:   qAthCED0052689
Assay Design:   Exonic
Chromosome Location:   3:8574020-8574147question
Amplicon Length:   98
Splice Variants Targeted:   AT5G11630.1 AT3G23780.1 AT3G23780.2

Gene Information

This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.

Gene Symbol:   NRPD2A
Gene Name:   Nuclear RNA polymerase D2A
Aliases:   Not Available
RefSeq:   NM_001203028 NM_113282
Ensembl:   AT3G23780
Entrez:   821960
UniGene:   At.37653
Chromosome Mapping:   Not Available

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