PrimePCR™ SYBR® Green Assay: VCS, Arabidopsis

PrimePCR Primer Assays for Real-Time PCR oligo primer pair tube for SYBR Green gene expression

Real-time PCR primer assay designed for SYBR® Green gene expression analysis.

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Assay Information

Technology:   qPCR
Assay Type:   SYBR® Green
Application:   Gene Expression
Unique Assay ID:   qAthCED0052483
Assay Design:   Exonic
Chromosome Location:   3:4308884-4309033question
Amplicon Length:   120
Splice Variants Targeted:   AT3G13290.1 AT3G13300.1 AT3G13300.2

Gene Information

Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.

Gene Symbol:   VCS
Gene Name:   Transducin/WD40 repeat-like superfamily protein
Aliases:   Not Available
RefSeq:   NM_112175 NM_180245
Ensembl:   AT3G13300
Entrez:   820530
UniGene:   At.8098
Chromosome Mapping:   Not Available

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