PrimePCR™ Probe Assay: PGBD3, Human

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RT PROBE IMG ALT TEXT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $190.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCIP0040229
Assay Design:   Intron-spanning
Chromosome Location:   10:50725072-50732172question
Amplicon Length:   160
Splice Variants Targeted:   ENST00000546361 ENST00000198939 ENST00000560626 ENST00000558305 ENST00000312493 ENST00000273666 ENST00000225873 ENST00000585380 ENST00000374127 ENST00000447839 ENST00000515869

Gene Information

The piggyBac family of proteins found in diverse animals are transposases related to the transposase of the canonical piggyBac transposon from the moth Trichoplusia ni. This family also includes genes in several genomes including human that appear to have been derived from the piggyBac transposons. This gene belongs to the subfamily of piggyBac transposable element derived (PGBD) genes. The PGBD proteins appear to be novel with no obvious relationship to other transposases or other known protein families. This gene overlaps with the ERCC6 gene on chromosome 10 and pseudogenes of this locus have been found on chromosomes 4 5 and 12. [provided by RefSeq Jul 2008]

Gene Symbol:   PGBD3
Gene Name:   piggyBac transposable element derived 3
Aliases:   FLJ90201
RefSeq:   NC_000010.10 NG_009442.1 NT_030059.13
Ensembl:   ENSG00000243251
Entrez:   267004
UniGene:   Not Available
Chromosome Mapping:   10q11

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999600
y-intercept 36.350000
Efficiency 95

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Number Description Download
6262 PrimePCR Assays: Meeting the MIQE Guidelines by Full Wet-Lab Validation, Rev B Click to download
6263 PrimePCR Pathway Analysis: Pathway Curation and Real-Time PCR Panel Design Strategy, Rev B Click to download
6290 PrimePCR Assays and Panels Brochure, Rev D Click to download
LIT10026370 Instruction Manual, PrimePCR Assays, Panels, and Controls, Rev E Click to download
10039761 PrimePCR™ Assays Quick Guide, Ver B Click to download
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