PrimePCR™ Probe Assay: TRIM39, Human

RT

Real-time PCR probe assay designed for gene expression analysis. Probe assays consist of unlabeled PCR primers and a dual labeled fluorescent probe.

List Price:    $196.00
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Assay Information

Technology:   qPCR
Assay Type:   Probe
Application:   Gene Expression
Unique Assay ID:   qHsaCEP0040073
Assay Design:   exonic
Chromosome Location:   6:30296700-30296814question
Amplicon Length:   85
Splice Variants Targeted:   ENST00000552257 ENST00000546617 ENST00000552594 ENST00000550063 ENST00000552520 ENST00000426469 ENST00000418079 ENST00000419790 ENST00000429069 ENST00000443109 ENST00000450421 ENST00000452705 ENST00000450818 ENST00000453856 ENST00000416213 ENST00000412150 ENST00000458607 ENST00000431871 ENST00000446397 ENST00000434862 ENST00000431272 ENST00000421662 ENST00000424575 ENST00000549841 ENST00000550432 ENST00000552805 ENST00000549051 ENST00000550581 ENST00000424571 ENST00000447542 ENST00000400644 ENST

Gene Information

The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains a RING a B-box type 1 and a B-box type 2 and a coiled-coil region. The function of this protein has not been identified. This gene lies within the major histocompatibility complex class I region on chromosome 6. Alternate splicing results in two transcript variants encoding different isoforms. [provided by RefSeq Jul 2008]

Gene Symbol:   TRIM39
Gene Name:   tripartite motif containing 39
Aliases:   MGC32984, RNF23, TFP, TRIM39B
RefSeq:   NC_000006.11 NT_007592.15 NT_113891.2 NT_167244.1 NT_167245.1 NT_167246.1 NT_167248.1 NT_167249.1
Ensembl:   ENSG00000204599
Entrez:   56658
UniGene:   Hs.413493
Chromosome Mapping:   6p21.3

The below validation information is for the Primer Pair only   Download Validation Data (.pdf)


Products used to generate validation data:

Real-Time PCR Instrument CFX384 Real-Time PCR Detection System
Reverse Transcription Reagent iScript™ Advanced cDNA Synthesis Kit for RT-qPCR
Real-Time PCR Supermix SsoAdvanced™ SYBR® Green Supermix
Experimental Sample qPCR Human Reference Total RNA

Summary Data:

R2 0.999400
y-intercept 36.490000
Efficiency 93

Amplification Plot
Amplification of cDNA generated from universal RNA.

Amplification of cDNA generated from universal RNA.

Melt Peak
Melt curve analysis of above amplification.

Melt curve analysis of above amplification.

Standard Curve
Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Standard curve generated using 20 million copies of template diluted 10 fold to 20 copies.

Number Description Download
6262 PrimePCR Assays: Meeting the MIQE Guidelines by Full Wet-Lab Validation, Rev B Click to download
6263 PrimePCR Pathway Analysis: Pathway Curation and Real-Time PCR Panel Design Strategy, Rev B Click to download
6290 PrimePCR Assays and Panels Brochure, Rev D Click to download
LIT10026370 Instruction Manual, PrimePCR Assays, Panels, and Controls, Rev E Click to download
10039761 PrimePCR™ Assays Quick Guide, Ver B Click to download